Spreads signal on interaction network to identify altered subnetworks.

Documentation for package ‘BioNetSmooth’ version 1.0.0

construct_network	Builds a graph using a list of interacting genes or proteins
construct_weighted_network	Builds an edge weighted graph using a list of interacting genes or proteins
expr_mat	Input matrix for smoothing
network	dataframe of interacting proteins of C.elegans from STRING database
network_bias_correction	Network propagated scores are corrected by subtracted with mean inital propagated scores.
network_mapping	Maps initial expression scores to an interaction network
network_mapping_weighted	Maps initial expression scores to an edge weighted interaction network
network_smoothing	function for identifing active genes and their neighbours through propagating expression scores on an interaction network
propagate_algebra	propagates node scores on a graph